PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT13304
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family ARR-B
Protein Properties Length: 218aa    MW: 24079.5 Da    PI: 8.6831
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT13304genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like20.21.3e-06192212121
   G2-like   1 kprlrWtpeLHerFveaveqL 21 
               k++++Wt e+He Fv+av+qL
  EMT13304 192 KKKVEWTLEMHELFVNAVTQL 212
               6899****************9 PP

2Response_reg44.86.6e-16211251104
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT..SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg..mdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                   vl vdD+p+ ++ l+q+l++ gy ev++ +++ +al+ ++++   +D i++  +  g  mdG+ l+k+  ++   + i+++++++++e++++ ++ G
      EMT13304  21 VLAVDDDPVCLQTLTQMLRRGGY-EVTASASPADALKEVEKNPdgIDFIMTVAQTRGrgMDGVGLVKRVGKRY--PVILMFSGNETMETRERGMQEG 114
                   799********************.999999999999999888889****99988877779*********6666..699999**************** PP

                   ESEEEESS--H CS
  Response_reg  94 akdflsKpfdp 104
                   a     Kp   
      EMT13304 115 ACYLMDKPLRD 125
                   ***99999765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521729.96E-2017144IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.7E-2217148No hitNo description
SMARTSM004485.6E-1119132IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011026.80820136IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.3E-1221125IPR001789Signal transduction response regulator, receiver domain
CDDcd001566.49E-1422122No hitNo description
Gene3DG3DSA:1.10.10.604.6E-5190213IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0005622Cellular Componentintracellular
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MANGDKDMAT TELMETEGLK VLAVDDDPVC LQTLTQMLRR GGYEVTASAS PADALKEVEK  60
NPDGIDFIMT VAQTRGRGMD GVGLVKRVGK RYPVILMFSG NETMETRERG MQEGACYLMD  120
KPLRDVHIYF IWQQVVRWRR KAAGAATENP NPRHTQGVHL DDTPRKRGQG LNDSNKGKGA  180
SEGGLQLGTT KKKKVEWTLE MHELFVNAVT QLKTTGGA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLN1QXY61e-162N1QXY6_AEGTA; Two-component response regulator ARR12
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1950623
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.12e-21response regulator 11